ABOUT

Version 2

HOW TO CITE US

MirtronDB 2.0: enhanced database with novel mirtron discoveries [Manuscript in preparation for submission]
Fabiana Goes 1 , Matheus Fujimura Soares 3 , Vitor Gregorio 2 , Bruno Thiago de Lima Nichio 2 , Alisson Gaspar Chiquitto 2 , Flavia Lombardi Lopes 3 , Mark Basham 1 , Domingues, D. S. 4* and Paschoal, A. R. 1,2*

FILIATION:
1 The Rosalind Franklin Institute, Rutherford Appleton Laboratory, Harwell Campus, Didcot, England, UK,
2 Department of Computer Science, Bioinformatics Graduate Program, Federal University of Technology - Paraná, Cornélio Procópio, PR, Brazil
3 São Paulo State University (UNESP), School of Veterinary Medicine, Araçatuba, Brazil
4 Department of Genetics, “Luiz de Queiroz” College of Agriculture, University of São Paulo, Piracicaba, São Paulo, Brazil

SCHEMATIC PROCESS TO BUILD MirtronDB V2

Overview of the MirtronDB v2 construction pipeline, comprising three main stages: mirtron retrieval, in silico prediction of potential novel mirtrons, and comparison with reference microRNA databases to identify overlapping entries.

Version 1

HOW TO CITE US

mirtronDB: a mirtron knowledge base [BIOINFORMATICS]
Fonseca, B. H. R. 1 , Domingues, D. S. 1,2 and Paschoal, A. R. 1*

FILIATION:
1 Department of Computer Science, Bioinformatics Graduate Program, Federal University of Technology - Paraná, Cornélio Procópio, PR, Brazil
2 Department of Botany, Institute of Biosciences, São Paulo State University, UNESP, Rio Claro - SP, Brazil

SCHEMATIC PROCESS TO BUILD mirtronDB

(1) Data collection: literature investigation and data collection;
(2) Data modelling: data organization and structured integration;
(3) Data analysis: transforming raw data into usable information; and
(4) Website interface: a portal web for the scientific community.